- Class: 3
- Architecture: 3.40:3-Layer(aba) Sandwich
- Topology: 3.40.350:Creatine Amidinohydrolase; Chain A, domain 1
- Homology: 3.40.350.10:Creatinase/prolidase N-terminal domain
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1a16 | [A4] | [A4] | [A4] | 2.3 | LEU:LEUCINE MN:MANGANESE (II) ION PRO:PROLINE | |||
1chm | [A2] | [A2] | [A2] | 1.9 | CMS:CARBAMOYL SARCOSINE | |||
1jaw | [A] | [A] | [A] | 2.7 | ACT:ACETATE ION MN:MANGANESE (II) ION | |||
1kp0 | [A2] | [A2] | [A2] | 2.7 | ||||
1m35 | [A4] | [A4] | [A4] | 2.4 | MN:MANGANESE (II) ION | |||
1n51 | [A4][a4] | [A4][a4] | [A4][a4] | 2.3 | 01B:(2S,3R)-3-AMINO-2-HYDROXY-4-PHENYLBUTANOIC ACID MN:MANGANESE (II) ION NH2:AMINO GROUP | |||
1pv9 | [A2] | [A2] | [A2] | 2 | ZN:ZINC ION | |||
1w2m | [A4] | [A4] | [A4] | 2.4 | CA:CALCIUM ION CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE IPA:ISOPROPYL ALCOHOL | |||
1w7v | [A4][a4] | [A4][a4] | [A4][a4] | 2 | CL:CHLORIDE ION MG:MAGNESIUM ION OCS:CYSTEINESULFONIC ACID ZN:ZINC ION | |||
1wbq | [A4] | [A4] | [A4] | 2.3 | CL:CHLORIDE ION MG:MAGNESIUM ION OCS:CYSTEINESULFONIC ACID ZN:ZINC ION | |||
1wl6 | [A4] | [A4] | [A4] | 2 | CL:CHLORIDE ION IPA:ISOPROPYL ALCOHOL MG:MAGNESIUM ION XPE:3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL | |||
1wl9 | [A4] | [A4] | [A4] | 1.9 | CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE MN:MANGANESE (II) ION | |||
1wlr | [A4] | [A4] | [A4] | 2.1 | CL:CHLORIDE ION IPA:ISOPROPYL ALCOHOL PG4:TETRAETHYLENE GLYCOL | |||
1wn1 | [A2] | [A2] | [A2] | 2.25 | CO:COBALT (II) ION | |||
1wy2 | [A2] | [A2] | [A2] | 1.7 | CAC:CACODYLATE ION GOL:GLYCEROL MG:MAGNESIUM ION ZN:ZINC ION | |||
2bh3 | [A4] | [A4] | [A4] | 2.4 | FLC:CITRATE ANION LEU:LEUCINE MG:MAGNESIUM ION PRO:PROLINE ZN:ZINC ION | |||
2bha | [A4][a4] | [A4][a4] | [A4][a4] | 2.4 | FLC:CITRATE ANION MG:MAGNESIUM ION | |||
2bhb | [A4] | [A4] | [A4] | 2.41 | FLC:CITRATE ANION MG:MAGNESIUM ION MRD:(4R)-2-METHYLPENTANE-2,4-DIOL ZN:ZINC ION | |||
2bhc | [A4] | [A4] | [A4] | 2.4 | FLC:CITRATE ANION MG:MAGNESIUM ION NA:SODIUM ION | |||
2bhd | [A4][a4] | [A4][a4] | [A4][a4] | 2.5 | FLC:CITRATE ANION MG:MAGNESIUM ION | |||
2bn7 | [A4] | [A4] | [A4] | 2.4 | FLC:CITRATE ANION LEU:LEUCINE MG:MAGNESIUM ION MN:MANGANESE (II) ION PRO:PROLINE ZN:ZINC ION | |||
2bws | [A4] | [A4] | [A4] | 1.75 | CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE MN:MANGANESE (II) ION | |||
2bwt | [A4] | [A4] | [A4] | 2.9 | FLC:CITRATE ANION MG:MAGNESIUM ION MN:MANGANESE (II) ION MPD:(4S)-2-METHYL-2,4-PENTANEDIOL | |||
2bwu | [A4] | [A4] | [A4] | 2.2 | FLC:CITRATE ANION MG:MAGNESIUM ION NA:SODIUM ION | |||
2bwv | [A4] | [A4] | [A4] | 1.7 | CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE MN:MANGANESE (II) ION | |||
2bww | [A4] | [A4] | [A4] | 2.61 | FLC:CITRATE ANION MG:MAGNESIUM ION MN:MANGANESE (II) ION MRD:(4R)-2-METHYLPENTANE-2,4-DIOL | |||
2bwx | [A4] | [A4] | [A4] | 1.7 | CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE MN:MANGANESE (II) ION | |||
2bwy | [A4] | [A4] | [A4] | 2.4 | FLC:CITRATE ANION MG:MAGNESIUM ION MN:MANGANESE (II) ION SO4:SULFATE ION | |||
2how | [A2] | [A2] | [A2] | 2.4 | ||||
2iw2 | [A2] | [A2] | [A2] | 1.82 | NA:SODIUM ION | |||
2okn | [A2] | [A2] | [A2] | 2.45 | MN:MANGANESE (II) ION PI:HYDROGENPHOSPHATE ION | |||
2v3x | [A4][a4] | [A4][a4] | [A4][a4] | 1.7 | CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE MN:MANGANESE (II) ION | |||
2v3y | [A4][a4] | [A4][a4] | [A4][a4] | 1.6 | CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE MN:MANGANESE (II) ION | |||
2v3z | [A4][a4] | [A4][a4] | [A4][a4] | 1.56 | CL:CHLORIDE ION CSO:S-HYDROXYCYSTEINE MN:MANGANESE (II) ION | |||
2zsg | [A2] | [A2] | [A2] | 1.65 | CL:CHLORIDE ION GOL:GLYCEROL NA:SODIUM ION ZN:ZINC ION | |||
3bip | [A] | [A] | [A] | 1.94 | ||||
3biq | [A] | [A] | [A] | 1.73 | GOL:GLYCEROL | |||
3bit | [A] | [A] | [A] | 1.9 | BME:BETA-MERCAPTOETHANOL CL:CHLORIDE ION GOL:GLYCEROL MSE:SELENOMETHIONINE | |||
3cb5 | [A] | [A] | [A] | 2.05 | B3P:2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL MSE:SELENOMETHIONINE | |||
3cb6 | [A] | [A] | [A] | 1.84 | ||||
3ctz | [A2] | [A2] | [A2] | 1.6 | CA:CALCIUM ION MN:MANGANESE (II) ION NA:SODIUM ION P6G:HEXAETHYLENE GLYCOL | |||
3i7m | [A] | [A] | [A] | 1.46 | MSE:SELENOMETHIONINE | |||
3ig4 | [A6] | [A6] | [A6] | 2.89 | MN:MANGANESE (II) ION MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
3il0 | [A] | [A] | [A] | 2.2 | GOL:GLYCEROL | |||
3l24 | [A2] | [A2] | [A2] | 2.3 | GOA:GLYCOLIC ACID MN:MANGANESE (II) ION | |||
3l7g | [A3] | [A3] | [A3] | 2.7 | M44:N,N___sq___-BIS(1-METHYLETHYL)PHOSPHORODIAMIDIC ACID MN:MANGANESE (II) ION | |||
3o5v | [A] | [A] | [A] | 1.85 | CL:CHLORIDE ION GOL:GLYCEROL MSE:SELENOMETHIONINE | |||
3ooo | [A2] | [A2] | [A2] | 1.57 | MSE:SELENOMETHIONINE | |||
3ovk | [A4] | [A4] | [A4] | 2 | MSE:SELENOMETHIONINE | |||
3peb | [A] | [A] | [A] | 1.86 | EDO:1,2-ETHANEDIOL MSE:SELENOMETHIONINE NA:SODIUM ION NHE:2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | |||
3pn9 | [A4] | [A4] | [A4] | 2 | MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
3q6d | [A] | [A] | [A] | 1.97 | CA:CALCIUM ION GOL:GLYCEROL | |||
3qoc | [A] | [A] | [A] | 2.15 | CL:CHLORIDE ION MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
3rva | [A2] | [A2] | [A2] | 1.8 | CSO:S-HYDROXYCYSTEINE MN:MANGANESE (II) ION NI:NICKEL (II) ION PO4:PHOSPHATE ION | |||
4b28 | [A2] | [A2] | [A2] | 2.15 | FE:FE (III) ION | |||
4ege | [A2] | [A2] | [A2] | 2.2 | EDO:1,2-ETHANEDIOL UNX:UNKNOWN ATOM OR ION ZN:ZINC ION | |||
4fkc | [A2] | [A2] | [A2] | 2.6 | CD:CADMIUM ION | |||
4pv4 | [A2] | [A2] | [A2] | 1.76 | 1PE:PENTAETHYLENE GLYCOL EDO:1,2-ETHANEDIOL MG:MAGNESIUM ION P6G:HEXAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL | |||
4qr8 | [A2] | [A2] | [A2] | 2 | MG:MAGNESIUM ION | |||
4r60 | [A2] | [A2] | [A2] | 1.83 | MN:MANGANESE (II) ION NA:SODIUM ION PO4:PHOSPHATE ION | |||
4rgz | [A2] | [A2] | [A2] | 2.6 | PO4:PHOSPHATE ION ZN:ZINC ION | |||
4rzy | [A2] | [A2] | [A2] | 1.95 | FE:FE (III) ION MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID | |||
4rzz | [A2] | [A2] | [A2] | 2.1 | FE:FE (III) ION GOL:GLYCEROL PO4:PHOSPHATE ION | |||
4s00 | [A2] | [A2] | [A2] | 2.1 | AKR:ACRYLIC ACID FE:FE (III) ION GOL:GLYCEROL | |||
4s01 | [A2] | [A2] | [A2] | 2.1 | AKR:ACRYLIC ACID FE:FE (III) ION GOL:GLYCEROL | |||
4s2r | [A2] | [A2] | [A2] | 1.95 | ZN:ZINC ION | |||
4s2t | [A2][a2] | [A2][a2] | [A2][a2] | 2.15 | 01B:(2S,3R)-3-AMINO-2-HYDROXY-4-PHENYLBUTANOIC ACID SO4:SULFATE ION ZN:ZINC ION | |||
4zng | [A2] | [A2] | [A2] | 2.25 | CAC:CACODYLATE ION GOL:GLYCEROL MN:MANGANESE (II) ION | |||
4zwo | [A2] | [A2] | [A2] | 2.14 | GOA:GLYCOLIC ACID GOL:GLYCEROL MN:MANGANESE (II) ION | |||
4zwp | [A2] | [A2] | [A2] | 2.4 | BA:BARIUM ION GOL:GLYCEROL M44:N,N___sq___-BIS(1-METHYLETHYL)PHOSPHORODIAMIDIC ACID MN:MANGANESE (II) ION | |||
4zwu | [A2] | [A2] | [A2] | 2.2 | BA:BARIUM ION GOA:GLYCOLIC ACID GOL:GLYCEROL MN:MANGANESE (II) ION | |||
5cde | [A2] | [A2] | [A2] | 1.85 | SO4:SULFATE ION ZN:ZINC ION | |||
5cdl | [A2] | [A2] | [A2] | 1.8 | MN:MANGANESE (II) ION MSE:SELENOMETHIONINE PO4:PHOSPHATE ION | |||
5cdv | [A2] | [A2] | [A2] | 1.45 | MN:MANGANESE (II) ION NA:SODIUM ION PO4:PHOSPHATE ION | |||
5ce6 | [A] | [A] | [A] | 1.7 | ACT:ACETATE ION K:POTASSIUM ION NA:SODIUM ION | |||
5cik | [A2] | [A2] | [A2] | 2.2 | CIT:CITRIC ACID GOL:GLYCEROL | |||
5cnx | [A2] | [A2] | [A2] | 2.6 | CAC:CACODYLATE ION GOL:GLYCEROL NA:SODIUM ION ZN:ZINC ION | |||
5e2c | [A2] | [A2] | [A2] | 1.7 | MSE:SELENOMETHIONINE | |||
5e5b | [A] | [A] | [A] | 1.84 | ||||
5fcf | [A2][a] | [A2][a] | [A2][a] | 1.85 | GOL:GLYCEROL MN:MANGANESE (II) ION PEG:DI(HYDROXYETHYL)ETHER PO4:PHOSPHATE ION | |||
5fch | [A2][a] | [A2][a] | [A2][a] | 1.95 | GOL:GLYCEROL PEG:DI(HYDROXYETHYL)ETHER PO4:PHOSPHATE ION ZN:ZINC ION | |||
5giq | [A2] | [A2] | [A2] | 1.8 | PO4:PHOSPHATE ION ZN:ZINC ION | |||
5giu | [A2] | [A2] | [A2] | 1.61 | NA:SODIUM ION PO4:PHOSPHATE ION | |||
5m4g | [A2] | [A2] | [A2] | 1.48 | GOL:GLYCEROL MN:MANGANESE (II) ION OH:HYDROXIDE ION | |||
5m4j | [A2] | [A2] | [A2] | 1.55 | GLY:GLYCINE GOL:GLYCEROL NA:SODIUM ION PRO:PROLINE | |||
5m4l | [A2] | [A2] | [A2] | 1.49 | GOL:GLYCEROL LEU:LEUCINE MG:MAGNESIUM ION NA:SODIUM ION OH:HYDROXIDE ION PRO:PROLINE | |||
5m4q | [A2] | [A2] | [A2] | 1.73 | GOL:GLYCEROL MN:MANGANESE (II) ION OH:HYDROXIDE ION PRO:PROLINE | |||
5mby | [A2] | [A2] | [A2] | 1.55 | GLY:GLYCINE GOL:GLYCEROL MN:MANGANESE (II) ION OH:HYDROXIDE ION PRO:PROLINE | |||
5mbz | [A2] | [A2] | [A2] | 1.5 | CL:CHLORIDE ION GLY:GLYCINE GOL:GLYCEROL MN:MANGANESE (II) ION NA:SODIUM ION OH:HYDROXIDE ION PRO:PROLINE | |||
5mc0 | [A2] | [A2] | [A2] | 1.56 | CL:CHLORIDE ION GLY:GLYCINE GOL:GLYCEROL MN:MANGANESE (II) ION NA:SODIUM ION OH:HYDROXIDE ION PRO:PROLINE | |||
5mc1 | [A2] | [A2] | [A2] | 1.43 | GLY:GLYCINE GOL:GLYCEROL MN:MANGANESE (II) ION NA:SODIUM ION PRO:PROLINE | |||
5mc2 | [A2] | [A2] | [A2] | 1.7 | GLY:GLYCINE GOL:GLYCEROL MN:MANGANESE (II) ION NA:SODIUM ION PRO:PROLINE | |||
5mc3 | [A2] | [A2] | [A2] | 1.52 | GLY:GLYCINE GOL:GLYCEROL MN:MANGANESE (II) ION NA:SODIUM ION OH:HYDROXIDE ION PRO:PROLINE | |||
5mc4 | [A2] | [A2] | [A2] | 1.8 | GLY:GLYCINE GOL:GLYCEROL MN:MANGANESE (II) ION OH:HYDROXIDE ION PRO:PROLINE | |||
5mc5 | [A2] | [A2] | [A2] | 1.9 | GLY:GLYCINE GOL:GLYCEROL MN:MANGANESE (II) ION OH:HYDROXIDE ION PRO:PROLINE | |||
5umt | [A] | [A] | [A] | 2.09 | EDO:1,2-ETHANEDIOL GOL:GLYCEROL | |||
5wze | [A4] | [A4] | [A4] | 1.78 | ALA:ALANINE CA:CALCIUM ION EDO:1,2-ETHANEDIOL GOL:GLYCEROL MN:MANGANESE (II) ION NA:SODIUM ION PGE:TRIETHYLENE GLYCOL PRO:PROLINE SO4:SULFATE ION | |||
5xm2 | [A] | [A] | [A] | 2.19 | GOL:GLYCEROL PEG:DI(HYDROXYETHYL)ETHER | |||
6a8m | [A] | [A] | [A] | 1.7 | ||||
6h2p | [A2] | [A2] | [A2] | 1.48 | CAC:CACODYLATE ION GOL:GLYCEROL MN:MANGANESE (II) ION | |||
6h2q | [A2] | [A2] | [A2] | 1.78 | GOL:GLYCEROL LEU:LEUCINE MN:MANGANESE (II) ION PRO:PROLINE |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA